Academic Articles & Research Papers

The Human Microbiome before Birth.

Blaser MJ, Dominguez-Bello MG • Cell host & microbe (2016)

PMC PMC Public Access (View-Only) DOI: 10.1016/j.chom.2016.10.014 PMC: PMC13595822

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Methanogens: vital but threatened members of the human microbiome?

Subrahmanian A, Patel A, Veerus L, Dominguez-Bello MG et al. • Trends in microbiology (2026)

PMC PMC Public Access (View-Only) DOI: 10.1016/j.tim.2026.08.008 PMC: PMC13595821

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The microbiome and non-occupational human-animal interactions: a scoping review.

MacInnis EM, Ebbeskotte T, AbdelKhalek A, Nieforth LO • Frontiers in public health (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/fpubh.2026.1938888 PMC: PMC13595336

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Characterization of the oral microbiome in the diverse South African population by PacBio HiFi sequencing.

Govender P, Cason E, Ghai M • Applied microbiology and biotechnology (2026)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00253-025-13652-6 PMC: PMC12808187

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Grand challenge in microbiome data science: recovering the microbiome as a system.

Belenky P, Meyer F • Frontiers in microbiology (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/fmicb.2026.1970739 PMC: PMC13597785

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Fecal microbiota transplantation in adolescents with obesity induces limited and donor-dependent remodeling of the gut microbiome.

Jiang X, Shi S, Li M, Zhang Y et al. • Frontiers in endocrinology (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/fendo.2026.1927870 PMC: PMC13597358

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Environmental Factors and the Symbiont Cardinium Influence the Bacterial Microbiome of Spider Mites Across the Landscape.

Liu HH, Chen L, Shao HB, Gao S et al. • Microbial ecology (2023)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00248-023-02314-7 PMC: PMC13497225

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Water Level Fluctuations Modulate the Microbiomes Involved in Biogeochemical Cycling in Floodplains.

Hao Z, Wang Q, Wang J, Deng Y et al. • Microbial ecology (2023)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00248-023-02331-6 PMC: PMC13497837

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Synergizing Ecotoxicology and Microbiome Data Is Key for Developing Global Indicators of Environmental Antimicrobial Resistance.

Makumbi JP, Leareng SK, Pierneef RE, Makhalanyane TP • Microbial ecology (2024)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00248-024-02463-3 PMC: PMC11607014

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The Microbiome and Coxiella Diversity Found in Amblyomma hebraeum and Dermacentor rhinocerinus Ticks Sampled from White Rhinoceros.

Mitchell JK, Matthee S, Ndhlovu A, Miller M et al. • Microbial ecology (2025)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00248-025-02549-6 PMC: PMC12098525

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A Review of Diet and Foraged Pollen Interactions with the Honeybee Gut Microbiome.

Meehan DE, O'Toole PW • Microbial ecology (2025)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00248-025-02551-y PMC: PMC12116653

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Advancements in Algal Microbiome Research: A Game-Changer for Climate Resilience and Invasion Success?

Vila Duplá M • Microbial ecology (2025)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00248-025-02563-8 PMC: PMC12152038

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Diversity of the Ixodes ricinus Microbiome Across Belgian Ecoregions and Its Association with Pathogen and Symbiont Presence.

Philippe C, Denis LA, Fonville M, Devriendt B et al. • Microbial ecology (2025)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00248-025-02571-8 PMC: PMC12245972

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Microbiomes of 2024's Periodical Cicada Brood XIII Vary By Species and Location.

Price A, Mog SYA, Dubach J, Billington C et al. • Microbial ecology (2025)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00248-025-02609-x PMC: PMC12532616

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The Body Wall Microbiome of the Terrestrial Slug Deroceras laeve Reveals Potential Endosymbionts and Shares Core Organisms with Other Mollusks.

Gutiérrez-Sarmiento W, Fosado-Mendoza M, Lozano-Flores C, Varela-Echavarría A • Microbial ecology (2025)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00248-025-02652-8 PMC: PMC12664854

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The Microbiome of an Invasive Antarctic insect, Eretmoptera Murphyi (Diptera: Chironomidae), and its Potential Role in Nutrient Cycling.

Brayley ODM, McCready K, Liu S, Convey P et al. • Microbial ecology (2026)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00248-026-02706-5 PMC: PMC12966229

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Diversity and Composition of the Microbiome Associated with Adult of the Green Shield Bug Palomena prasina (Hemiptera: Pentatomidae).

Çağatay NS, Dageri A, Saruhan I, Tuncer C et al. • Microbial ecology (2026)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00248-026-02779-2 PMC: PMC13275768

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Rare Taxa and Stochastic Drift Drive the Microbiome Assembly of the Invasive Pest Drosophila suzukii, While Host Filtering Structures the Grape Sour Rot Community.

Bhandari R, Wills Z, Harris J, Salie M et al. • Microbial ecology (2026)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00248-026-02819-x PMC: PMC13562485

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Organ-Specific Human Microbiomes and Dysbiosis: Mechanistic Links to Disease and Emerging Therapeutic Strategies.

Alanazi A • Journal of clinical laboratory analysis (2026)

PMC PMC Public Access (View-Only) DOI: 10.1002/jcla.70307 PMC: PMC13399894

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A data-driven universal gut microbiome health assessment: a machine learning framework trained on large metagenomic data.

Kumar B, Lorusso E, Fosso B, Pesole G • Frontiers in microbiology (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/fmicb.2026.1925500 PMC: PMC13601785

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