Which barcode to decipher freshwater microalgal assemblages? Tests on mock communities
Overview & Synopsis
Microalgae taxa can be identified with short DNA barcodes. Eight primer pairs for 16S and five for 23S were tested in silico and with mock communities including cyanobacteria and eukaryotic microalgae. We conclude that the 23S primer pair ECLA23S_F1/ECLA23S_R1 was the best candidate to decipher freshwater phytoplankton communities.
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Document Information
| Document Title | Which barcode to decipher freshwater microalgal assemblages? Tests on mock communities |
|---|---|
| Author / Organization | Alexis Canino, Clarisse Lemonnier, Benjamin Alric, Agnes Bouchez, Isabelle Domaizon, Christophe Laplace-Treyture, Frédéric Rimet |
| Subject & Discipline | Multidisciplinary Academic Open Research |
| Categories | Science & Mathematics |
| Publication Year | 2023 |
| License / Rights | Open Access / Creative Commons |
| Resource Verification | Listed PDF (Verification Pending) |
| Original Host Website |
HAL Open Science
(hal.science)
|
| File Format | application/pdf (Portable Document Format) |
| Language | EN |
| Catalog ID | DOC-191796 |
| Original Source Link | Visit Source Page on hal.science » |